About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides08373FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides08374-
Paelopatides08375ENDONUCLEASE-RELATED
Paelopatides08376POL PROTEIN
Paelopatides08377-
Paelopatides08378-
Paelopatides08379MONOCARBOXYLATE TRANSPORTER
Paelopatides08380SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides08381-
Paelopatides08382ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides08383REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides08384SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides08385N-LYSINE METHYLTRANSFERASE KMT5A
Paelopatides08386-
Paelopatides08387PROTEIN CBG26694
Paelopatides08388REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides08389REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides08390DEOXYRIBONUCLEASE
Paelopatides08391CYSTEINE DESULFURASE
Paelopatides08392BUCENTAUR RELATED
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