About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s056.g0044.t1
Lsat_s056.g0045.t1
Lsat_s056.g0046.t1
Lsat_s056.g0047.t1HYR DOMAIN-CONTAINING PROTEIN
Lsat_s056.g0048.t1HYR DOMAIN-CONTAINING PROTEIN
Lsat_s056.g0049.t1
Lsat_s056.g0050.t1COAGULATION FACTOR
Lsat_s056.g0051.t1HYR DOMAIN-CONTAINING PROTEIN
Lsat_s056.g0052.t1
Lsat_s056.g0053.t1HYR DOMAIN-CONTAINING PROTEIN
Lsat_s056.g0054.t1
Lsat_s056.g0055.t1HYR DOMAIN-CONTAINING PROTEIN
Lsat_s056.g0056.t1
Lsat_s056.g0057.t1PROTEIN CBR-CLEC-78
Lsat_s056.g0058.t1
Lsat_s056.g0059.t1KICSTOR COMPLEX PROTEIN C12ORF66
Lsat_s056.g0060.t1
Lsat_s056.g0061.t1LIPOPOLYSACCHARIDE CHOLINEPHOSPHOTRANSFERASE LICD
Lsat_s056.g0062.t1FLAVIN MONOAMINE OXIDASE
Lsat_s056.g0063.t1AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
Lsat_s056.g0064.t1NEUROFILAMENT TRIPLET M PROTEIN-LIKE PROTEIN
Lsat_s056.g0065.t1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Lsat_s056.g0066.t1NOTCH LIGAND FAMILY MEMBER
Lsat_s056.g0067.t1CRUMBS FAMILY MEMBER
Lsat_s056.g0068.t1
Lsat_s056.g0069.t1NOTCH LIGAND FAMILY MEMBER
Lsat_s056.g0070.t1
Lsat_s056.g0071.t1
Lsat_s056.g0072.t1CYTOSOLIC CARBOXYPEPTIDASE
Lsat_s056.g0073.t1SYNDECAN
Lsat_s056.g0074.t1TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3
Lsat_s056.g0075.t1SORTING NEXIN 17 AND 27
Lsat_s056.g0076.t1NUCLEOTIDE KINASE
Lsat_s056.g0077.t1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Lsat_s056.g0078.t1
Lsat_s056.g0079.t1
Lsat_s056.g0080.t1
Lsat_s056.g0081.t1SCC1 / RAD21 FAMILY MEMBER
Lsat_s056.g0082.t1BAX INHIBITOR-RELATED
Lsat_s056.g0083.t1
Lsat_s056.g0084.t1ATILLA, ISOFORM B-RELATED-RELATED
Lsat_s056.g0085.t1NUCLEAR SEGREGATION PROTEIN BFR1
Lsat_s056.g0086.t1PYRROLINE-5-CARBOXYLATE REDUCTASE
Lsat_s056.g0087.t1STAR-RELATED LIPID TRANSFER PROTEIN 9
Lsat_s056.g0088.t1
Lsat_s056.g0089.t1STAR-RELATED LIPID TRANSFER PROTEIN 9
Lsat_s056.g0090.t1GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Lsat_s056.g0091.t1GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Lsat_s056.g0092.t1GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Lsat_s056.g0093.t1GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
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