About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s055.g0004.t1RNA BINDING PROTEIN
Lsat_s055.g0005.t1
Lsat_s055.g0006.t1MRN COMPLEX-INTERACTING PROTEIN
Lsat_s055.g0007.t1DIACYLGLYCEROL KINASE
Lsat_s055.g0008.t1SCHLAFEN
Lsat_s055.g0009.t1VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED
Lsat_s055.g0010.t1ANAPHASE-PROMOTING COMPLEX SUBUNIT 13
Lsat_s055.g0011.t1UNCHARACTERIZED
Lsat_s055.g0012.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s055.g0013.t1
Lsat_s055.g0014.t1
Lsat_s055.g0015.t1
Lsat_s055.g0016.t1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Lsat_s055.g0017.t1
Lsat_s055.g0018.t1KYNURENINASE
Lsat_s055.g0019.t1ACTIVATOR OF BASAL TRANSCRIPTION 1
Lsat_s055.g0020.t1ORGANIC ANION TRANSPORTER
Lsat_s055.g0021.t1TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9
Lsat_s055.g0022.t1ANDROGEN-INDUCED PROTEIN 1-RELATED
Lsat_s055.g0023.t1
Lsat_s055.g0024.t1EXS-RELATED PROTEIN
Lsat_s055.g0025.t1SCHNURRI, ISOFORM F
Lsat_s055.g0026.t1
Lsat_s055.g0027.t1UNCHARACTERIZED
Lsat_s055.g0028.t1
Lsat_s055.g0029.t1
Lsat_s055.g0030.t1
Lsat_s055.g0031.t1
Lsat_s055.g0032.t1
Lsat_s055.g0033.t1POTASSIUM CHANNEL, SUBFAMILY K
Lsat_s055.g0034.t1
Lsat_s055.g0035.t1
Lsat_s055.g0036.t1
Lsat_s055.g0037.t1POTASSIUM CHANNEL, SUBFAMILY K
Lsat_s055.g0038.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s055.g0039.t1
Lsat_s055.g0040.t1MYOSIN LIGHT CHAIN 1, 3
Lsat_s055.g0041.t1CRUMBS FAMILY MEMBER
Lsat_s055.g0042.t1CRUMBS FAMILY MEMBER
Lsat_s055.g0043.t1CRUMBS FAMILY MEMBER
Lsat_s055.g0044.t1RAB FAMILY
Lsat_s055.g0045.t1SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED
Lsat_s055.g0046.t1SURFACE ANTIGEN BSPA-LIKE-RELATED
Lsat_s055.g0047.t1
Lsat_s055.g0048.t1
Lsat_s055.g0049.t1
Lsat_s055.g0050.t1CALCIUM BINDING PROTEIN
Lsat_s055.g0051.t1TETRASPANIN
Lsat_s055.g0052.t1
Lsat_s055.g0053.t1SERINE/THREONINE-PROTEIN KINASE DOA-RELATED
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