About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s057.g0016.t1
Lsat_s057.g0017.t1
Lsat_s057.g0018.t1
Lsat_s057.g0019.t1SI:CH211-171H4.7-RELATED
Lsat_s057.g0020.t1
Lsat_s057.g0021.t1
Lsat_s057.g0022.t1
Lsat_s057.g0023.t1
Lsat_s057.g0024.t1COLLAGEN ALPHA
Lsat_s057.g0025.t1WD40 REPEAT DOMAIN 95
Lsat_s057.g0026.t1CATION CHANNEL SPERM-ASSOCIATED PROTEIN 1
Lsat_s057.g0027.t1SOLUBLE NSF ATTACHMENT PROTEIN SNAP
Lsat_s057.g0028.t1GOLGIN-84
Lsat_s057.g0029.t1DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN
Lsat_s057.g0030.t1SODIUM/CALCIUM EXCHANGER
Lsat_s057.g0031.t1
Lsat_s057.g0032.t1
Lsat_s057.g0033.t1
Lsat_s057.g0034.t1N-ALPHA-ACETYLTRANSFERASE 40
Lsat_s057.g0035.t1ADENYLOSUCCINATE SYNTHETASE
Lsat_s057.g0036.t1
Lsat_s057.g0037.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s057.g0038.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s057.g0039.t1PROTEIN CBG26694
Lsat_s057.g0040.t1
Lsat_s057.g0041.t1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Lsat_s057.g0042.t1
Lsat_s057.g0043.t1
Lsat_s057.g0044.t1
Lsat_s057.g0045.t1TYROSINE-PROTEIN KINASE RECEPTOR
Lsat_s057.g0046.t1
Lsat_s057.g0047.t1UNCHARACTERIZED
Lsat_s057.g0048.t1SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER
Lsat_s057.g0049.t1
Lsat_s057.g0050.t1UNCHARACTERIZED
Lsat_s057.g0051.t1CYCLINS
Lsat_s057.g0052.t1
Lsat_s057.g0053.t1CYCLINS
Lsat_s057.g0054.t1FUKUTIN RELATED PROTEIN
Lsat_s057.g0055.t150S RIBOSOMAL PROTEIN L4
Lsat_s057.g0056.t1HYDROLETHALUS SYNDROME PROTEIN 1
Lsat_s057.g0057.t1UNCHARACTERIZED
Lsat_s057.g0058.t1DNA-DIRECTED RNA POLYMERASE II, III
Lsat_s057.g0059.t1STG PROTEIN
Lsat_s057.g0060.t1-
Lsat_s057.g0061.t1
Lsat_s057.g0062.t1
Lsat_s057.g0063.t1
Lsat_s057.g0064.t1
Lsat_s057.g0065.t1-
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