About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s054.g0116.t1POLYCYSTIN FAMILY MEMBER
Lsat_s054.g0117.t1
Lsat_s054.g0118.t1CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB
Lsat_s054.g0119.t1
Lsat_s054.g0120.t1BETA TRANSDUCIN-RELATED PROTEIN
Lsat_s054.g0121.t1
Lsat_s054.g0122.t1TYPE I INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE
Lsat_s054.g0123.t1TUDOR DOMAIN CONTAINING PROTEIN
Lsat_s054.g0124.t1
Lsat_s054.g0125.t1SUGAR HYDROLASE-RELATED
Lsat_s054.g0126.t1PROGRAMMED CELL DEATH 4
Lsat_s054.g0127.t1MYOSIN LIGHT CHAIN 1, 3
Lsat_s054.g0128.t1MYOSIN LIGHT CHAIN 1, 3
Lsat_s054.g0129.t1
Lsat_s054.g0130.t1
Lsat_s054.g0131.t1
Lsat_s054.g0132.t1
Lsat_s054.g0133.t1CALCIUM BINDING PROTEINS
Lsat_s054.g0134.t1
Lsat_s054.g0135.t1
Lsat_s054.g0136.t1
Lsat_s054.g0137.t1-
Lsat_s054.g0138.t1
Lsat_s054.g0139.t1
Lsat_s054.g0140.t1MUCIN 26B
Lsat_s054.g0141.t1
Lsat_s054.g0142.t1
Lsat_s054.g0143.t1NEGATIVE ELONGATION FACTOR A NELF-A
Lsat_s054.g0144.t1
Lsat_s054.g0145.t1HOMEOBOX PROTEIN NKX
Lsat_s054.g0146.t1
Lsat_s054.g0147.t1
Lsat_s054.g0148.t1HOMEOBOX PROTEIN NKX
Lsat_s054.g0149.t1LEUCINE AMINOPEPTIDASE-RELATED
Lsat_s054.g0150.t1TRNA-PSEUDOURIDINE SYNTHASE
Lsat_s054.g0151.t1
Lsat_s054.g0152.t1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s054.g0153.t1
Lsat_s054.g0154.t1
Lsat_s054.g0155.t1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s054.g0156.t1ALPHA-MANNOSIDASE 2C1
Lsat_s054.g0157.t1ALPHA-MANNOSIDASE 2C1
Lsat_s054.g0158.t1
Lsat_s054.g0159.t1ALPHA-MANNOSIDASE 2C1
Lsat_s054.g0160.t1ALPHA-MANNOSIDASE 2C1
Lsat_s054.g0161.t1
Lsat_s054.g0162.t1ALPHA-MANNOSIDASE 2C1
Lsat_s055.g0001.t1UNCHARACTERIZED
Lsat_s055.g0002.t1RHO GTPASE ACTIVATING PROTEIN 18,19-RELATED
Lsat_s055.g0003.t1RNA BINDING PROTEIN
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