Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s057.g0116.t1 | |
Lsat_s057.g0117.t1 | |
Lsat_s057.g0118.t1 | |
Lsat_s057.g0119.t1 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 4 |
Lsat_s057.g0120.t1 | PEROXIREDOXIN |
Lsat_s057.g0121.t1 | - |
Lsat_s057.g0122.t1 | JNK1/MAPK8-ASSOCIATED MEMBRANE PROTEIN |
Lsat_s057.g0123.t1 | SOLUTE CARRIER FAMILY 5 |
Lsat_s057.g0124.t1 | HL07962P-RELATED |
Lsat_s057.g0125.t1 | PUTATIVE PHOSPHOTRANSFERASE |
Lsat_s057.g0126.t1 | FMRFAMIDE RECEPTOR-RELATED |
Lsat_s057.g0127.t1 | CYTOCHROME P450 508A4-RELATED |
Lsat_s057.g0128.t1 | |
Lsat_s057.g0129.t1 | |
Lsat_s057.g0130.t1 | CYTOCHROME P450 508A4-RELATED |
Lsat_s057.g0131.t1 | CYTOCHROME P450 508A4-RELATED |
Lsat_s057.g0132.t1 | CYTOCHROME P450 508A4-RELATED |
Lsat_s057.g0133.t1 | CYTOCHROME P450 508A4-RELATED |
Lsat_s057.g0134.t1 | CYTOCHROME P450 508A4-RELATED |
Lsat_s057.g0135.t1 | CYTOCHROME P450 508A4-RELATED |
Lsat_s057.g0136.t1 | CYTOCHROME P450 508A4-RELATED |
Lsat_s057.g0137.t1 | CYTOCHROME P450 508A4-RELATED |
Lsat_s057.g0138.t1 | |
Lsat_s057.g0139.t1 | PROTEIN CBG12054-RELATED |
Lsat_s057.g0140.t1 | |
Lsat_s057.g0141.t1 | GDP-MAN:MAN(3)GLCNAC(2)-PP-DOL ALPHA-1,2-MANNOSYLTRANSFERASE |
Lsat_s057.g0142.t1 | |
Lsat_s057.g0143.t1 | UNCHARACTERIZED |
Lsat_s057.g0144.t1 | SALVADOR FAMILY WW DOMAIN-CONTAINING PROTEIN 1 |
Lsat_s057.g0145.t1 | RADIAL SPOKEHEAD-RELATED |
Lsat_s057.g0146.t1 | ATAXIN-3-RELATED |
Lsat_s057.g0147.t1 | TRANSMEMBRANE PROTEIN 179 |
Lsat_s057.g0148.t1 | TRANSMEMBRANE PROTEIN 179 |
Lsat_s057.g0149.t1 | B30.2/SPRY DOMAIN-CONTAINING PROTEIN |
Lsat_s057.g0150.t1 | COFILIN-RELATED |
Lsat_s057.g0151.t1 | COFILIN-RELATED |
Lsat_s057.g0152.t1 | WD REPEAT-CONTAINING PROTEIN 81 |
Lsat_s057.g0153.t1 | N-ALPHA-ACETYLTRANSFERASE 30 |
Lsat_s057.g0154.t1 | |
Lsat_s057.g0155.t1 | |
Lsat_s057.g0156.t1 | 30S RIBOSOMAL PROTEIN S18 |
Lsat_s057.g0157.t1 | MITOCHONDRIAL RIBOSOMAL PROTEIN S18 |
Lsat_s057.g0158.t1 | BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 1A |
Lsat_s057.g0159.t1 | BECLIN 1-ASSOCIATED AUTOPHAGY-RELATED KEY REGULATOR |
Lsat_s057.g0160.t1 | DISCS LARGE |
Lsat_s057.g0161.t1 | UNCHARACTERIZED |
Lsat_s057.g0162.t1 | MINA53 MYC INDUCED NUCLEAR ANTIGEN |
Lsat_s057.g0163.t1 | FIBROUS SHEATH INTERACTING PROTEIN 1 |
Lsat_s058.g0001.t1 | |
Lsat_s058.g0002.t1 | LY6/PLAUR DOMAIN-CONTAINING PROTEIN 6 |