About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s058.g0003.t1
Lsat_s058.g0004.t1SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Lsat_s058.g0005.t1
Lsat_s058.g0006.t1
Lsat_s058.g0007.t1
Lsat_s058.g0008.t1
Lsat_s058.g0009.t1SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Lsat_s058.g0010.t1-
Lsat_s058.g0011.t1TYROSINASE FAMILY MEMBER
Lsat_s058.g0012.t1TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 4
Lsat_s058.g0013.t1TRANSLATION ELONGATION FACTOR-RELATED
Lsat_s058.g0014.t1GOLGIN
Lsat_s058.g0015.t1
Lsat_s058.g0016.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s058.g0017.t1INTERFERON REGULATORY FACTOR
Lsat_s058.g0018.t1INTERFERON REGULATORY FACTOR
Lsat_s058.g0019.t1-
Lsat_s058.g0020.t1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Lsat_s058.g0021.t1SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE
Lsat_s058.g0022.t1SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE
Lsat_s058.g0023.t1SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE
Lsat_s058.g0024.t1
Lsat_s058.g0025.t1GROWTH FACTOR RECEPTOR-BOUND PROTEIN
Lsat_s058.g0026.t1BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1
Lsat_s058.g0027.t1ZINC FINGER PROTEIN 622
Lsat_s058.g0028.t1SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1
Lsat_s058.g0029.t1LD33804P
Lsat_s058.g0030.t1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
Lsat_s058.g0031.t1IA-2 PROTEIN TYROSINE PHOSPHATASE, ISOFORM C
Lsat_s058.g0032.t1GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2
Lsat_s058.g0033.t1TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE
Lsat_s058.g0034.t1TRANSFERASE, PUTATIVE-RELATED
Lsat_s058.g0035.t1TRANSFERASE, PUTATIVE-RELATED
Lsat_s058.g0036.t1TRANSFERASE, PUTATIVE-RELATED
Lsat_s058.g0037.t1
Lsat_s058.g0038.t1TRANSFERASE, PUTATIVE-RELATED
Lsat_s058.g0039.t1PROTEIN CBG12054-RELATED
Lsat_s058.g0040.t1
Lsat_s058.g0041.t1
Lsat_s058.g0042.t1UBIQUITIN LIGASE E3 ALPHA-RELATED
Lsat_s058.g0043.t160S RIBOSOMAL PROTEIN L37A
Lsat_s058.g0044.t1ADP-RIBOSYLATION-LIKE FACTOR 6-INTERACTING PROTEIN
Lsat_s058.g0045.t1TUBULIN
Lsat_s058.g0046.t1
Lsat_s058.g0047.t1
Lsat_s058.g0048.t1AGAP011572-PA
Lsat_s058.g0049.t1
Lsat_s058.g0050.t1TUBULIN FOLDING COFACTOR C
Lsat_s058.g0051.t1SODIUM/NUCLEOSIDE COTRANSPORTER
Lsat_s058.g0052.t1UNCHARACTERIZED
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