About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s058.g0103.t1
Lsat_s058.g0104.t1PHOSPHATASE, ORPHAN 1, 2
Lsat_s058.g0105.t1PHOSPHATASE, ORPHAN 1, 2
Lsat_s058.g0106.t1FORMATE DEHYDROGENASE 1
Lsat_s058.g0107.t1STEROL O-ACYLTRANSFERASE
Lsat_s058.g0108.t1MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER
Lsat_s058.g0109.t1
Lsat_s058.g0110.t1ATP-BINDING CASSETTE SUB-FAMILY B
Lsat_s058.g0111.t1ABC TRANSPORTER B FAMILY
Lsat_s058.g0112.t1
Lsat_s058.g0113.t1
Lsat_s058.g0114.t1
Lsat_s058.g0115.t1ABC TRANSPORTER B FAMILY
Lsat_s058.g0116.t1
Lsat_s058.g0117.t1ABC TRANSPORTER B FAMILY
Lsat_s058.g0118.t1
Lsat_s058.g0119.t1ABC TRANSPORTER B FAMILY
Lsat_s058.g0120.t1TRANSMEMBRANE CHANNEL-RELATED
Lsat_s058.g0121.t1
Lsat_s058.g0122.t1
Lsat_s058.g0123.t1
Lsat_s058.g0124.t1REPLICATION PROTEIN A3
Lsat_s058.g0125.t1WD40 DOMAIN-CONTAINING PROTEIN MIO FAMILY MEMBER
Lsat_s058.g0126.t1BCL-2 RELATED
Lsat_s058.g0127.t1SWIM-TYPE DOMAIN-CONTAINING PROTEIN
Lsat_s058.g0128.t1RNA-BINDING PROTEIN 33
Lsat_s058.g0129.t1
Lsat_s058.g0130.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Lsat_s058.g0131.t1
Lsat_s058.g0132.t1
Lsat_s058.g0133.t1
Lsat_s058.g0134.t1CADHERIN DOMAIN-CONTAINING PROTEIN
Lsat_s059.g0001.t1-
Lsat_s059.g0002.t1-
Lsat_s059.g0003.t1HEAVY PROTEIN, PUTATIVE-RELATED
Lsat_s059.g0004.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Lsat_s059.g0005.t1
Lsat_s059.g0006.t1HEAVY PROTEIN, PUTATIVE-RELATED
Lsat_s059.g0007.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Lsat_s059.g0008.t1
Lsat_s059.g0009.t1RAN GTPASE-ACTIVATING PROTEIN 1
Lsat_s059.g0010.t1
Lsat_s059.g0011.t1SHIPPO-1-RELATED
Lsat_s059.g0012.t1
Lsat_s059.g0013.t1
Lsat_s059.g0014.t1RAN GTPASE-ACTIVATING PROTEIN 1
Lsat_s059.g0015.t1
Lsat_s059.g0016.t1
Lsat_s059.g0017.t1
Lsat_s059.g0018.t15-HYDROXYTRYPTAMINE RECEPTOR
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