About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s058.g0053.t1FORMIN
Lsat_s058.g0054.t1LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
Lsat_s058.g0055.t1CHAPERONE ATP11
Lsat_s058.g0056.t1
Lsat_s058.g0057.t1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
Lsat_s058.g0058.t1
Lsat_s058.g0059.t1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
Lsat_s058.g0060.t1GLYCOSYLTRANSFERASE 14 FAMILY MEMBER
Lsat_s058.g0061.t1
Lsat_s058.g0062.t1TBP-1 INTERACTING PROTEIN
Lsat_s058.g0063.t1GH11602P
Lsat_s058.g0064.t1
Lsat_s058.g0065.t1
Lsat_s058.g0066.t1ATP-DEPENDENT RNA HELICASE DBP3
Lsat_s058.g0067.t1BETA1,3-GALACTOSYLTRANSFERASE
Lsat_s058.g0068.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s058.g0069.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s058.g0070.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s058.g0071.t1
Lsat_s058.g0072.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s058.g0073.t1LEUCINE ZIPPER PROTEIN 4-RELATED
Lsat_s058.g0074.t1
Lsat_s058.g0075.t1RGD1565685 PROTEIN
Lsat_s058.g0076.t1
Lsat_s058.g0077.t1
Lsat_s058.g0078.t1
Lsat_s058.g0079.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s058.g0080.t1COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN
Lsat_s058.g0081.t1
Lsat_s058.g0082.t1-
Lsat_s058.g0083.t1
Lsat_s058.g0084.t1
Lsat_s058.g0085.t1N-ACETYLGALACTOSAMINYLTRANSFERASE
Lsat_s058.g0086.t1SUCCINATE--HYDROXYMETHYLGLUTARATE COA-TRANSFERASE
Lsat_s058.g0087.t1
Lsat_s058.g0088.t1SERINE PROTEASE INHIBITOR
Lsat_s058.g0089.t1BETA LACTAMASE DOMAIN
Lsat_s058.g0090.t1
Lsat_s058.g0091.t1REPETIN
Lsat_s058.g0092.t1TGF-BETA FAMILY
Lsat_s058.g0093.t1
Lsat_s058.g0094.t1
Lsat_s058.g0095.t1
Lsat_s058.g0096.t1
Lsat_s058.g0097.t1
Lsat_s058.g0098.t1
Lsat_s058.g0099.t1
Lsat_s058.g0100.t1NG5
Lsat_s058.g0101.t1
Lsat_s058.g0102.t1
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