About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s061.g0031.t1
Lsat_s061.g0032.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s061.g0033.t1
Lsat_s061.g0034.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s061.g0035.t1
Lsat_s061.g0036.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s061.g0037.t1CLATHRIN HEAVY CHAIN RELATED
Lsat_s061.g0038.t1
Lsat_s061.g0039.t126S PROTEASOME REGULATORY SUBUNIT
Lsat_s061.g0040.t1
Lsat_s061.g0041.t1
Lsat_s061.g0042.t1AGAP003327-PA
Lsat_s061.g0043.t1
Lsat_s061.g0044.t1PR DOMAIN ZINC FINGER PROTEIN
Lsat_s061.g0045.t1NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1
Lsat_s061.g0046.t1SPHINGOLIPID DELTA 4 DESATURASE/C-4 HYDROXYLASE PROTEIN DES2
Lsat_s061.g0047.t1TRANSCRIPTIONAL REPRESSOR PROTEIN YY
Lsat_s061.g0048.t1NUCLEAR FACTOR NF-KAPPA-B PROTEIN
Lsat_s061.g0049.t1TESTIS-SPECIFIC EXPRESSED PROTEIN 55
Lsat_s061.g0050.t1WD-40 REPEAT PROTEIN
Lsat_s061.g0051.t1UNCHARACTERIZED
Lsat_s061.g0052.t1AP-5 COMPLEX SUBUNIT MU-1
Lsat_s061.g0053.t1DICER-RELATED
Lsat_s061.g0054.t1ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 6
Lsat_s061.g0055.t1EPITHELIAL MEMBRANE PROTEIN-RELATED
Lsat_s061.g0056.t1
Lsat_s061.g0057.t1IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
Lsat_s061.g0058.t1
Lsat_s061.g0059.t1
Lsat_s061.g0060.t1SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
Lsat_s061.g0061.t1
Lsat_s061.g0062.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s061.g0063.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s061.g0064.t1
Lsat_s061.g0065.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s061.g0066.t1
Lsat_s061.g0067.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s061.g0068.t1PROTEIN CBG11839-RELATED
Lsat_s061.g0069.t1
Lsat_s061.g0070.t1PROTEIN CBG12054-RELATED
Lsat_s061.g0071.t1
Lsat_s061.g0072.t1ATILLA, ISOFORM B-RELATED-RELATED
Lsat_s061.g0073.t1ATILLA, ISOFORM B-RELATED-RELATED
Lsat_s061.g0074.t1RBP-RELATED
Lsat_s061.g0075.t1
Lsat_s061.g0076.t1
Lsat_s061.g0077.t1
Lsat_s061.g0078.t1
Lsat_s061.g0079.t1PROSTAGLANDIN REDUCTASE
Lsat_s061.g0080.t1
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