Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s061.g0131.t1 | |
| Lsat_s061.g0132.t1 | EXPORTIN 1/5 |
| Lsat_s061.g0133.t1 | TRANSCRIPTIONAL REPRESSOR PROTEIN YY |
| Lsat_s061.g0134.t1 | UNCHARACTERIZED |
| Lsat_s061.g0135.t1 | UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL |
| Lsat_s061.g0136.t1 | |
| Lsat_s061.g0137.t1 | |
| Lsat_s061.g0138.t1 | |
| Lsat_s061.g0139.t1 | |
| Lsat_s061.g0140.t1 | |
| Lsat_s061.g0141.t1 | SWAP-70 RECOMBINASE |
| Lsat_s061.g0142.t1 | |
| Lsat_s061.g0143.t1 | DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER |
| Lsat_s061.g0144.t1 | SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE |
| Lsat_s061.g0145.t1 | COMM DOMAIN-CONTAINING PROTEIN 1 |
| Lsat_s061.g0146.t1 | C1ORF73 PROTEIN |
| Lsat_s061.g0147.t1 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN |
| Lsat_s061.g0148.t1 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Lsat_s061.g0149.t1 | CHAPERONIN |
| Lsat_s061.g0150.t1 | LETHAL 2 DENTICLELESS PROTEIN RETINOIC ACID-REGULATED NUCLEAR MATRIX-ASSOCIATED PROTEIN |
| Lsat_s061.g0151.t1 | NUCLEAR HORMONE RECEPTOR |
| Lsat_s061.g0152.t1 | EXPORTIN 1/5 |
| Lsat_s061.g0153.t1 | |
| Lsat_s061.g0154.t1 | |
| Lsat_s061.g0155.t1 | BAND 7 PROTEIN-RELATED |
| Lsat_s061.g0156.t1 | BAND 7 PROTEIN-RELATED |
| Lsat_s061.g0157.t1 | BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER |
| Lsat_s061.g0158.t1 | BAND 7 PROTEIN-RELATED |
| Lsat_s061.g0159.t1 | BAND 7 PROTEIN-RELATED |
| Lsat_s061.g0160.t1 | BAND 7 PROTEIN-RELATED |
| Lsat_s061.g0161.t1 | |
| Lsat_s061.g0162.t1 | BAND 7 PROTEIN-RELATED |
| Lsat_s061.g0163.t1 | MALE-ENHANCED ANTIGEN-1 |
| Lsat_s061.g0164.t1 | MITOCHONDRIAL RIBOSOMAL PROTEIN L48 |
| Lsat_s061.g0165.t1 | HOMOLOC-13 |
| Lsat_s061.g0166.t1 | GUANYLYL CYCLASE |
| Lsat_s061.g0167.t1 | NHL REPEAT-CONTAINING PROTEIN-RELATED |
| Lsat_s061.g0168.t1 | |
| Lsat_s061.g0169.t1 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
| Lsat_s061.g0170.t1 | |
| Lsat_s061.g0171.t1 | PEPTIDASE |
| Lsat_s061.g0172.t1 | |
| Lsat_s061.g0173.t1 | |
| Lsat_s061.g0174.t1 | UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN |
| Lsat_s062.g0001.t1 | |
| Lsat_s062.g0002.t1 | |
| Lsat_s062.g0003.t1 | PROTEIN CBG26694 |
| Lsat_s062.g0004.t1 | |
| Lsat_s062.g0005.t1 | ALPHA- AND GAMMA-ADAPTIN-BINDING PROTEIN P34 |
| Lsat_s062.g0006.t1 | TIMELESS INTERACTING-RELATED |
