About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s059.g0119.t1
Lsat_s059.g0120.t1
Lsat_s059.g0121.t1
Lsat_s059.g0122.t1UNC-93 RELATED
Lsat_s059.g0123.t1PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER
Lsat_s059.g0124.t1
Lsat_s059.g0125.t1
Lsat_s059.g0126.t1
Lsat_s059.g0127.t1
Lsat_s060.g0001.t1NG5
Lsat_s060.g0002.t1MYOTROPHIN
Lsat_s060.g0003.t1CALCYPHOSIN
Lsat_s060.g0004.t1
Lsat_s060.g0005.t1CALCYPHOSIN
Lsat_s060.g0006.t1CALCYPHOSIN
Lsat_s060.g0007.t1CALCYPHOSIN
Lsat_s060.g0008.t1SEMINAL PLASMA PROTEIN
Lsat_s060.g0009.t1
Lsat_s060.g0010.t1-
Lsat_s060.g0011.t1
Lsat_s060.g0012.t1FRIZZLED
Lsat_s060.g0013.t1
Lsat_s060.g0014.t1
Lsat_s060.g0015.t1-
Lsat_s060.g0016.t1
Lsat_s060.g0017.t1
Lsat_s060.g0018.t1
Lsat_s060.g0019.t1-
Lsat_s060.g0020.t1CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
Lsat_s060.g0021.t1
Lsat_s060.g0022.t1CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
Lsat_s060.g0023.t1
Lsat_s060.g0024.t1
Lsat_s060.g0025.t1
Lsat_s060.g0026.t1
Lsat_s060.g0027.t1AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
Lsat_s060.g0028.t1
Lsat_s060.g0029.t1
Lsat_s060.g0030.t1THROMBOSPONDIN
Lsat_s060.g0031.t1
Lsat_s060.g0032.t1
Lsat_s060.g0033.t1
Lsat_s060.g0034.t1
Lsat_s060.g0035.t1
Lsat_s060.g0036.t1
Lsat_s060.g0037.t1
Lsat_s060.g0038.t1
Lsat_s060.g0039.t1
Lsat_s060.g0040.t1
Lsat_s060.g0041.t1
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