About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s059.g0069.t1
Lsat_s059.g0070.t1
Lsat_s059.g0071.t1PROTEIN IWS1 HOMOLOG
Lsat_s059.g0072.t1INTRAFLAGELLAR TRANSPORT PROTEIN 81 HOMOLOG
Lsat_s059.g0073.t1MICROSOMAL SIGNAL PEPTIDASE 25 KDA SUBUNIT
Lsat_s059.g0074.t120 KD NUCLEAR CAP BINDING PROTEIN
Lsat_s059.g0075.t1DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
Lsat_s059.g0076.t1RP42 RELATED
Lsat_s059.g0077.t1CARBONIC ANHYDRASE
Lsat_s059.g0078.t1
Lsat_s059.g0079.t1CARBONIC ANHYDRASE
Lsat_s059.g0080.t1
Lsat_s059.g0081.t11-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED
Lsat_s059.g0082.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s059.g0083.t1AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE
Lsat_s059.g0084.t1PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
Lsat_s059.g0085.t1
Lsat_s059.g0086.t1ENZYMATIC POLYPROTEIN-RELATED
Lsat_s059.g0087.t1
Lsat_s059.g0088.t1MYB-LIKE PROTEIN V
Lsat_s059.g0089.t1TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Lsat_s059.g0090.t1
Lsat_s059.g0091.t1
Lsat_s059.g0092.t1
Lsat_s059.g0093.t1
Lsat_s059.g0094.t1
Lsat_s059.g0095.t1HELICASE
Lsat_s059.g0096.t1
Lsat_s059.g0097.t1
Lsat_s059.g0098.t1
Lsat_s059.g0099.t1
Lsat_s059.g0100.t1
Lsat_s059.g0101.t1DIACYLGLYCEROL KINASE
Lsat_s059.g0102.t1OSJNBA0004B13.7 PROTEIN
Lsat_s059.g0103.t1
Lsat_s059.g0104.t1
Lsat_s059.g0105.t1
Lsat_s059.g0106.t1SWIM-TYPE DOMAIN-CONTAINING PROTEIN
Lsat_s059.g0107.t1ARGININE AND GLUTAMATE-RICH PROTEIN 1
Lsat_s059.g0108.t1DYNEIN HEAVY CHAIN
Lsat_s059.g0109.t1RFX TRANSCRIPTION FACTOR FAMILY
Lsat_s059.g0110.t1SODIUM/POTASSIUM-DEPENDENT ATPASE BETA SUBUNIT
Lsat_s059.g0111.t1SPOT14 FAMILY MEMBER
Lsat_s059.g0112.t1SODIUM/POTASSIUM-DEPENDENT ATPASE BETA SUBUNIT
Lsat_s059.g0113.t1CULLIN
Lsat_s059.g0114.t1PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Lsat_s059.g0115.t1
Lsat_s059.g0116.t1
Lsat_s059.g0117.t1CALPAIN
Lsat_s059.g0118.t1
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