About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s060.g0092.t1
Lsat_s060.g0093.t1
Lsat_s060.g0094.t1AMMONIUM TRANSPORTER
Lsat_s060.g0095.t1AMMONIUM TRANSPORTER
Lsat_s060.g0096.t1
Lsat_s060.g0097.t1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
Lsat_s060.g0098.t1
Lsat_s060.g0099.t1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
Lsat_s060.g0100.t1PHOSPHOINOSITOL 3-PHOSPHATE-BINDING PROTEIN
Lsat_s060.g0101.t1
Lsat_s060.g0102.t1
Lsat_s060.g0103.t1
Lsat_s060.g0104.t1
Lsat_s060.g0105.t1HIV-1 REV BINDING PROTEIN 2, 3
Lsat_s060.g0106.t1TRANSMEMBRANE PROTEIN C9ORF91
Lsat_s060.g0107.t1
Lsat_s060.g0108.t1
Lsat_s060.g0109.t1
Lsat_s060.g0110.t1
Lsat_s060.g0111.t1
Lsat_s060.g0112.t1
Lsat_s060.g0113.t1
Lsat_s060.g0114.t1GLYCOGEN SYNTHASE
Lsat_s060.g0115.t1LIPASE MATURATION FACTOR
Lsat_s060.g0116.t1LEUCINE-RICH REPEAT-CONTAINING
Lsat_s060.g0117.t1LIPASE MATURATION FACTOR
Lsat_s060.g0118.t1CONDENSIN-2 COMPLEX SUBUNIT H2
Lsat_s060.g0119.t1DED DOMAIN-CONTAINING PROTEIN
Lsat_s060.g0120.t1UNCHARACTERIZED
Lsat_s060.g0121.t1N-ACETYLGLUCOSAMINYLTRANSFERASE VI
Lsat_s060.g0122.t1
Lsat_s060.g0123.t1N-ACETYLGLUCOSAMINYLTRANSFERASE VI
Lsat_s060.g0124.t1PROTEIN B, PUTATIVE-RELATED-RELATED
Lsat_s060.g0125.t1N-ACETYLGLUCOSAMINYLTRANSFERASE VI
Lsat_s060.g0126.t1
Lsat_s060.g0127.t1N-ACETYLGLUCOSAMINYLTRANSFERASE VI
Lsat_s060.g0128.t1ANTIGEN BSP, PUTATIVE-RELATED
Lsat_s060.g0129.t1UNCHARACTERIZED
Lsat_s060.g0130.t1ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING
Lsat_s060.g0131.t1
Lsat_s060.g0132.t1PROTEIN PITCHFORK
Lsat_s060.g0133.t1EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
Lsat_s060.g0134.t1
Lsat_s060.g0135.t1
Lsat_s060.g0136.t1
Lsat_s060.g0137.t1HISTIDINE-RICH GLYCOPROTEIN
Lsat_s060.g0138.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s060.g0139.t1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s060.g0140.t1
Lsat_s060.g0141.t1
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