About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s064.g0035.t1
Lsat_s064.g0036.t1
Lsat_s064.g0037.t1
Lsat_s064.g0038.t1
Lsat_s064.g0039.t1
Lsat_s064.g0040.t1CAMK FAMILY PROTEIN KINASE
Lsat_s064.g0041.t1ACYL-COA-BINDING PROTEIN, ACBP
Lsat_s064.g0042.t1
Lsat_s064.g0043.t1
Lsat_s064.g0044.t1
Lsat_s064.g0045.t1
Lsat_s064.g0046.t1
Lsat_s064.g0047.t1DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
Lsat_s064.g0048.t1
Lsat_s064.g0049.t1PROTEIN C20ORF116-RELATED
Lsat_s064.g0050.t1
Lsat_s064.g0051.t1
Lsat_s064.g0052.t1
Lsat_s064.g0053.t1
Lsat_s064.g0054.t1LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN
Lsat_s064.g0055.t1
Lsat_s064.g0056.t1
Lsat_s064.g0057.t1CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS
Lsat_s064.g0058.t1
Lsat_s064.g0059.t1CHROMOSOME TRANSMISSION FIDELITY FACTOR 18
Lsat_s064.g0060.t1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Lsat_s064.g0061.t1
Lsat_s064.g0062.t1PROGRAMMED CELL DEATH PROTEIN 2-LIKE
Lsat_s064.g0063.t1-
Lsat_s064.g0064.t1
Lsat_s064.g0065.t1
Lsat_s064.g0066.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s064.g0067.t1RIKEN CDNA D130052B06 GENE
Lsat_s064.g0068.t1
Lsat_s064.g0069.t1FTP DOMAIN-CONTAINING PROTEIN
Lsat_s064.g0070.t1IMMUNOGLOBULIN
Lsat_s064.g0071.t1INNER KINETOCHORE SUBUNIT MAL2
Lsat_s064.g0072.t1TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBER
Lsat_s064.g0073.t1
Lsat_s064.g0074.t1
Lsat_s064.g0075.t1TRANSPOSON
Lsat_s064.g0076.t1AUTOSOMAL HIGHLY CONSERVED PROTEIN
Lsat_s064.g0077.t1SPHINGOMYELIN PHOSPHODIESTERASE
Lsat_s064.g0078.t1E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
Lsat_s064.g0079.t1PROTEIN CBG11839-RELATED
Lsat_s064.g0080.t1PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE
Lsat_s064.g0081.t1SPHINGOMYELIN PHOSPHODIESTERASE
Lsat_s064.g0082.t1VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE
Lsat_s064.g0083.t1PHOSPHATIDYLINOSITOL SYNTHASE
Lsat_s064.g0084.t1
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