Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s063.g0127.t1 | KINETOCHORE-ASSOCIATED PROTEIN 1 |
Lsat_s063.g0128.t1 | COILED COIL DOMAIN-CONTAINING PROTEIN 8, CCDC8 |
Lsat_s063.g0129.t1 | KINETOCHORE-ASSOCIATED PROTEIN 1 |
Lsat_s063.g0130.t1 | MITOGEN-ACTIVATED PROTEIN KINASE-BINDING PROTEIN 1 |
Lsat_s063.g0131.t1 | PARTNER OF SLD5 |
Lsat_s063.g0132.t1 | ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN |
Lsat_s063.g0133.t1 | RHO FAMILY GTPASE |
Lsat_s063.g0134.t1 | HL01030P-RELATED |
Lsat_s063.g0135.t1 | |
Lsat_s063.g0136.t1 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
Lsat_s063.g0137.t1 | UNCHARACTERIZED |
Lsat_s063.g0138.t1 | PHOSPHATIDYLINOSITOL KINASE |
Lsat_s063.g0139.t1 | ZINC FINGER PROTEIN-LIKE 1 |
Lsat_s063.g0140.t1 | CYTOKINE RECEPTOR |
Lsat_s063.g0141.t1 | NETRIN/LAMININ-RELATED |
Lsat_s063.g0142.t1 | |
Lsat_s064.g0001.t1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED |
Lsat_s064.g0002.t1 | PROTEIN FAM167A |
Lsat_s064.g0003.t1 | |
Lsat_s064.g0004.t1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED |
Lsat_s064.g0005.t1 | SOLUTE CARRIER FAMILY 22 MEMBER 18 |
Lsat_s064.g0006.t1 | SWIM-TYPE DOMAIN-CONTAINING PROTEIN |
Lsat_s064.g0007.t1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED |
Lsat_s064.g0008.t1 | |
Lsat_s064.g0009.t1 | |
Lsat_s064.g0010.t1 | |
Lsat_s064.g0011.t1 | OROFACIAL CLEFT 1 CANDIDATE GENE 1 PROTEIN |
Lsat_s064.g0012.t1 | 40S RIBOSOMAL PROTEIN S8 |
Lsat_s064.g0013.t1 | PROTEASOME INHIBITOR |
Lsat_s064.g0014.t1 | HYDROXYMETHYLGLUTARYL-COA LYASE |
Lsat_s064.g0015.t1 | HYDROXYMETHYLGLUTARYL-COA LYASE |
Lsat_s064.g0016.t1 | AXONEMAL INNER ARM DYNEIN LIGHT CHAIN 28 |
Lsat_s064.g0017.t1 | TETRATRICOPEPTIDE REPEAT PROTEIN |
Lsat_s064.g0018.t1 | |
Lsat_s064.g0019.t1 | |
Lsat_s064.g0020.t1 | |
Lsat_s064.g0021.t1 | LRRGT00142-RELATED |
Lsat_s064.g0022.t1 | |
Lsat_s064.g0023.t1 | |
Lsat_s064.g0024.t1 | |
Lsat_s064.g0025.t1 | |
Lsat_s064.g0026.t1 | - |
Lsat_s064.g0027.t1 | |
Lsat_s064.g0028.t1 | HOMEOBOX PROTEIN |
Lsat_s064.g0029.t1 | - |
Lsat_s064.g0030.t1 | |
Lsat_s064.g0031.t1 | |
Lsat_s064.g0032.t1 | |
Lsat_s064.g0033.t1 | |
Lsat_s064.g0034.t1 |