About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides09422-
Paelopatides09423L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides09424REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09425-
Paelopatides09426L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides09427MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10
Paelopatides09428MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10
Paelopatides09429WD40 REPEAT PROTEIN
Paelopatides09430-
Paelopatides09431-
Paelopatides09432-
Paelopatides09433INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides09434INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides09435-
Paelopatides09436CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING
Paelopatides09439-
Paelopatides09440ENZYMATIC POLYPROTEIN-RELATED
Paelopatides09441PROTEIN CBG26694
Paelopatides09442ZGC:195170
Paelopatides09443ENDONUCLEASE-RELATED
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