About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides09444EPM2A-INTERACTING PROTEIN 1
Paelopatides09445-
Paelopatides09446CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09447PROTEIN CBG26694
Paelopatides09448TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides09449BLOM7
Paelopatides09450-
Paelopatides09451OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides09452POL PROTEIN
Paelopatides09453PROTEIN CBG26694
Paelopatides09454-
Paelopatides09455-
Paelopatides09456-
Paelopatides09457-
Paelopatides094585-HYDROXYTRYPTAMINE RECEPTOR
Paelopatides09459-
Paelopatides09460GUANINE NUCLEOTIDE EXCHANGE FACTOR
Paelopatides09461INTEGRIN ALPHA
Paelopatides09462-
Paelopatides09463MOLYBDOPTERIN SYNTHASE SULFUR CARRIER SUBUNIT
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