About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides09506ENDONUCLEASE-RELATED
Paelopatides09507PROTEIN CBG26694
Paelopatides09508-
Paelopatides09509-
Paelopatides09510CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09511-
Paelopatides09512-
Paelopatides09513CENTROSOMAL PROTEIN OF 112 KDA
Paelopatides09514PROTEIN CBG26694
Paelopatides09515ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides09516ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides09517ZINC FINGER PROTEIN
Paelopatides09518REVERSE TRANSCRIPTASES
Paelopatides09519FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides09520REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09521COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
Paelopatides09524-
Paelopatides09525ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides09526PROTEIN CBG26694
Paelopatides09527ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
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