About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides09597CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09598-
Paelopatides09599-
Paelopatides09600-
Paelopatides09601TRANSPOSASE, PUTATIVE-RELATED
Paelopatides09602PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Paelopatides09603ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides09604-
Paelopatides09605SI:CH211-196P9.1-RELATED
Paelopatides09606REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09607RETINOL DEHYDROGENASE-RELATED
Paelopatides09608UNCHARACTERIZED
Paelopatides09609-
Paelopatides09610FAT ATYPICAL CADHERIN-RELATED
Paelopatides09611CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09612PUTATIVE-RELATED
Paelopatides09613SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides09614-
Paelopatides09615REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09616DIACYLGLYCEROL KINASE
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