About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides09637PROTEIN CBG26694
Paelopatides09638ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides09639-
Paelopatides09640AMMECR1 HOMOLOG
Paelopatides09641REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09642-
Paelopatides09643L-FUCOSE KINASE
Paelopatides09644L-FUCOSE KINASE
Paelopatides09645-
Paelopatides09646BUCENTAUR RELATED
Paelopatides09647ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides09648ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides09649FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides09650FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides09651FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides09654NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides09655PROTEIN CBG26694
Paelopatides09656PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides09657PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides09658PROTEIN CBG26694
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