About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides09679PROTEIN CBG26694
Paelopatides09680-
Paelopatides09681DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Paelopatides09682-
Paelopatides09683-
Paelopatides09684PROTEIN CBG26694
Paelopatides09685PROTEIN CBG26694
Paelopatides09686-
Paelopatides09687NETRIN RECEPTOR UNC5
Paelopatides09688POL PROTEIN
Paelopatides09689POL PROTEIN
Paelopatides09690ENZYMATIC POLYPROTEIN-RELATED
Paelopatides09691ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Paelopatides09692ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Paelopatides09693REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09694F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09695BETA TRANSDUCIN-RELATED PROTEIN
Paelopatides09696BETA TRANSDUCIN-RELATED PROTEIN
Paelopatides09697-
Paelopatides09698UNCHARACTERIZED
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