About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides09719-
Paelopatides09720CENTROSOMAL PROTEIN OF 290 KDA
Paelopatides09721PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides09722NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides09723POL PROTEIN
Paelopatides09724POL PROTEIN
Paelopatides09725-
Paelopatides09726REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09727OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides09728LEUCOKININ RECEPTOR-RELATED
Paelopatides09729REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09730-
Paelopatides09731UNCHARACTERIZED
Paelopatides09732N-ACETYLTRANSFERASE 6
Paelopatides09733AFTIPHILIN A-RELATED
Paelopatides09734-
Paelopatides09735-
Paelopatides09736REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09737BONUS, ISOFORM C-RELATED
Paelopatides09738REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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