About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides09761PYRUVATE DEHYDROGENASE KINASE
Paelopatides09762AGAP008170-PA
Paelopatides09763-
Paelopatides09764-
Paelopatides09765SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides09766ENZYMATIC POLYPROTEIN-RELATED
Paelopatides09768PROTEIN PBDC1
Paelopatides09769ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
Paelopatides09770NUCLEAR FUSION PROTEIN FUS2
Paelopatides09771PROTEIN CBG26694
Paelopatides09772PROTEIN CBG26694
Paelopatides09773ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09774-
Paelopatides09775REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09776UNCHARACTERIZED
Paelopatides09777-
Paelopatides09778UNCHARACTERIZED
Paelopatides09779-
Paelopatides09780ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides09781EPM2A-INTERACTING PROTEIN 1
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