About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s077.g0102.t1
Lsat_s077.g0103.t1CENTROSOMAL PROTEIN OF 112 KDA
Lsat_s077.g0104.t1AXIN
Lsat_s077.g0105.t1MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2
Lsat_s077.g0106.t126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4
Lsat_s077.g0107.t1PHOSPHATIDYLINOSITOL TRANSFER PROTEIN
Lsat_s077.g0108.t1UNCHARACTERIZED
Lsat_s077.g0109.t1
Lsat_s077.g0110.t1
Lsat_s077.g0111.t1
Lsat_s077.g0112.t1-
Lsat_s077.g0113.t1
Lsat_s077.g0114.t1
Lsat_s077.g0115.t1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Lsat_s077.g0116.t1PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS X PROTEIN
Lsat_s077.g0117.t1CHARGED MULTIVESICULAR BODY PROTEIN
Lsat_s077.g0118.t1
Lsat_s077.g0119.t1
Lsat_s077.g0120.t1MYB-LIKE PROTEIN V
Lsat_s077.g0121.t1RIBONUCLEASE
Lsat_s077.g0122.t1DNA2/NAM7 HELICASE FAMILY MEMBER
Lsat_s077.g0123.t1DNA2/NAM7 HELICASE FAMILY MEMBER
Lsat_s077.g0124.t1
Lsat_s077.g0125.t1
Lsat_s077.g0126.t1
Lsat_s077.g0127.t1
Lsat_s078.g0001.t1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Lsat_s078.g0002.t1
Lsat_s078.g0003.t1
Lsat_s078.g0004.t1
Lsat_s078.g0005.t1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Lsat_s078.g0006.t1BONUS, ISOFORM C-RELATED
Lsat_s078.g0007.t1UNCHARACTERIZED
Lsat_s078.g0008.t1FERMITIN 2-RELATED
Lsat_s078.g0009.t1REGULATOR OF MICROTUBULE DYNAMICS PROTEIN
Lsat_s078.g0010.t1-
Lsat_s078.g0011.t1
Lsat_s078.g0012.t1
Lsat_s078.g0013.t12-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED
Lsat_s078.g0014.t1UNCHARACTERIZED
Lsat_s078.g0015.t12-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED
Lsat_s078.g0016.t1
Lsat_s078.g0017.t1
Lsat_s078.g0018.t1
Lsat_s078.g0019.t1
Lsat_s078.g0020.t1
Lsat_s078.g0021.t1
Lsat_s078.g0022.t1
Lsat_s078.g0023.t1
Lsat_s078.g0024.t1CREB/ATF BZIP TRANSCRIPTION FACTOR
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