About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s079.g0019.t1FURRY-RELATED
Lsat_s079.g0020.t1DEATH DOMAIN-CONTAINING PROTEIN CRADD
Lsat_s079.g0021.t1CADHERIN-87A
Lsat_s079.g0022.t1
Lsat_s079.g0023.t1CADHERIN-87A
Lsat_s079.g0024.t1CADHERIN-87A
Lsat_s079.g0025.t1
Lsat_s079.g0026.t1CYCLINS
Lsat_s079.g0027.t1CYCLINS
Lsat_s079.g0028.t1
Lsat_s079.g0029.t1
Lsat_s079.g0030.t1
Lsat_s079.g0031.t1NEUROPEPTIDE Y RECEPTOR
Lsat_s079.g0032.t1
Lsat_s079.g0033.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s079.g0034.t1
Lsat_s079.g0035.t1UNCHARACTERIZED
Lsat_s079.g0036.t1TRANSMEMBRANE PROTEIN
Lsat_s079.g0037.t1RWD DOMAIN CONTAINING PROTEIN 2
Lsat_s079.g0038.t1RAD54-LIKE
Lsat_s079.g0039.t1UNCHARACTERIZED
Lsat_s079.g0040.t1
Lsat_s079.g0041.t1ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE
Lsat_s079.g0042.t1ORAL-FACIAL-DIGITAL SYNDROME 1 PROTEIN HOMOLOG
Lsat_s079.g0043.t1DFG10 PROTEIN
Lsat_s079.g0044.t1UNCHARACTERIZED
Lsat_s079.g0045.t1KELCH PROTEIN
Lsat_s079.g0046.t1DNA DAMAGE-INDUCIBLE APOPTOSIS SUPPRESSOR PROTEIN DDIAS
Lsat_s079.g0047.t1DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER
Lsat_s079.g0048.t1GLYCOSYLTRANSFERASE-RELATED
Lsat_s079.g0049.t1ENDONUCLEASE-RELATED
Lsat_s079.g0050.t1
Lsat_s079.g0051.t1
Lsat_s079.g0052.t1
Lsat_s079.g0053.t1MITOCHONDRIA-EATING PROTEIN-RELATED
Lsat_s079.g0054.t1
Lsat_s079.g0055.t1
Lsat_s079.g0056.t1
Lsat_s079.g0057.t1MYOSIN HEAVY CHAIN, NON-MUSCLE
Lsat_s079.g0058.t1CAMK FAMILY PROTEIN KINASE
Lsat_s079.g0059.t1COLLAGEN ALPHA
Lsat_s079.g0060.t1
Lsat_s079.g0061.t1GTP-BINDING PROTEIN 8
Lsat_s079.g0062.t1SERINE-THREONINE PROTEIN KINASE
Lsat_s079.g0063.t1
Lsat_s079.g0064.t1TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
Lsat_s079.g0065.t1
Lsat_s079.g0066.t1LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN
Lsat_s079.g0067.t1TRANSIENT RECEPTOR POTENTIAL CHANNEL
Lsat_s079.g0068.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
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