About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10086FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides10087FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides10088-
Paelopatides10089-
Paelopatides10090SACCHAROPINE DEHYDROGENASE
Paelopatides10091SACCHAROPINE DEHYDROGENASE
Paelopatides10092FANCONI ANEMIA GROUP D2 PROTEIN
Paelopatides10093ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides10094CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides10095PROTEIN CBG26694
Paelopatides10096RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN
Paelopatides10097PROTEIN CBG03580
Paelopatides10098ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides10099N-ACETYLGALACTOSAMINYLTRANSFERASE
Paelopatides10100PROTEIN CBG26694
Paelopatides101014-NITROPHENYLPHOSPHATASE-RELATED
Paelopatides10102-
Paelopatides10103-
Paelopatides10104U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD
Paelopatides10105-
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