About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10064-
Paelopatides10065-
Paelopatides10066-
Paelopatides10067ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides10068ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides10069ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides10071-
Paelopatides10072-
Paelopatides10074VACUOLAR PROTEIN SORTING 54
Paelopatides10075RETROTRANSPOSON
Paelopatides10076RETROTRANSPOSON
Paelopatides10077-
Paelopatides10078-
Paelopatides10079APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Paelopatides10080-
Paelopatides10081-
Paelopatides10082-
Paelopatides10083CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides10084-
Paelopatides10085CELL DIVISION PROTEIN KINASE
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