About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides09958REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09959NETRIN RECEPTOR UNC5
Paelopatides09960-
Paelopatides09961-
Paelopatides09962FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides09963FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides09964PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides09965PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides09966IP13529P
Paelopatides09967REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09968-
Paelopatides09969TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides09970TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides09972NETRIN RECEPTOR UNC5
Paelopatides09973-
Paelopatides09974TRANSPOSABLE ELEMENT-RELATED
Paelopatides09975ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides09976PROTEIN CBG26694
Paelopatides09977PROTEIN CBG26694
Paelopatides09978IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS
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