About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10106-
Paelopatides10107POL PROTEIN
Paelopatides10108ENDONUCLEASE-RELATED
Paelopatides10109-
Paelopatides10112FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides10113C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides10114-
Paelopatides10115-
Paelopatides10116EPM2A-INTERACTING PROTEIN 1
Paelopatides10117ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides10118FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides10119PROSTAGLANDIN REDUCTASE
Paelopatides10120UNCHARACTERIZED
Paelopatides10121ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides10122L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides10123-
Paelopatides10124FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides10125PROTEIN CBG26694
Paelopatides10126GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1
Paelopatides10127-
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