About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s081.g0052.t1
Lsat_s081.g0053.t1
Lsat_s081.g0054.t1RING FINGER AND KH DOMAIN CONTAINING PROTEIN 1
Lsat_s081.g0055.t1CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 1
Lsat_s081.g0056.t1
Lsat_s081.g0057.t1
Lsat_s081.g0058.t1BCL-2 RELATED
Lsat_s081.g0059.t1LORICRIN
Lsat_s081.g0060.t1
Lsat_s081.g0061.t1
Lsat_s081.g0062.t1
Lsat_s081.g0063.t1
Lsat_s081.g0064.t1
Lsat_s081.g0065.t1EXS-RELATED PROTEIN
Lsat_s081.g0066.t1FIBROUS SHEATH CABYR-BINDING PROTEIN
Lsat_s081.g0067.t1BONE MARROW PROTEOGLYCAN
Lsat_s081.g0068.t1RAS-LIKE FAMILY MEMBER 11
Lsat_s081.g0069.t1CST COMPLEX SUBUNIT CTC1
Lsat_s081.g0070.t1UNCHARACTERIZED
Lsat_s081.g0071.t1GLYCOSIDASE FAMILY 31
Lsat_s081.g0072.t1ZINC FINGER RNA-BINDING PROTEIN
Lsat_s081.g0073.t1ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Lsat_s081.g0074.t1UBIQUILIN
Lsat_s081.g0075.t1
Lsat_s081.g0076.t1PWWP DOMAIN-CONTAINING DNA REPAIR FACTOR 3 FAMILY MEMBER
Lsat_s081.g0077.t1ARRESTIN DOMAIN CONTAINING PROTEIN
Lsat_s081.g0078.t1
Lsat_s081.g0079.t1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Lsat_s081.g0080.t1PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2, MITOCHONDRIAL
Lsat_s081.g0081.t1ZINC FINGER PROTEIN
Lsat_s081.g0082.t1
Lsat_s081.g0083.t1
Lsat_s081.g0084.t1INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Lsat_s081.g0085.t1PROTEIN CBG26694
Lsat_s081.g0086.t1
Lsat_s081.g0087.t126S PROTEASOME REGULATORY SUBUNIT
Lsat_s081.g0088.t1
Lsat_s081.g0089.t130S RIBOSOMAL PROTEIN S16
Lsat_s081.g0090.t1LEUCINE RICH REPEAT PROTEIN
Lsat_s081.g0091.t1CALCIUM AND INTEGRIN BINDING FAMILY MEMBER 2
Lsat_s081.g0092.t1GUANINE NUCLEOTIDE EXCHANGE FACTOR
Lsat_s081.g0093.t1
Lsat_s081.g0094.t1
Lsat_s081.g0095.t1FACIOGENITAL DYSPLASIA PROTEIN
Lsat_s081.g0096.t1
Lsat_s081.g0097.t1
Lsat_s081.g0098.t1
Lsat_s082.g0001.t1DYNEIN HEAVY CHAIN FAMILY PROTEIN
Lsat_s082.g0002.t1
Lsat_s082.g0003.t1
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