Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s082.g0004.t1 | |
| Lsat_s082.g0005.t1 | |
| Lsat_s082.g0006.t1 | |
| Lsat_s082.g0007.t1 | |
| Lsat_s082.g0008.t1 | |
| Lsat_s082.g0009.t1 | |
| Lsat_s082.g0010.t1 | LEUCOKININ RECEPTOR-RELATED |
| Lsat_s082.g0011.t1 | |
| Lsat_s082.g0012.t1 | |
| Lsat_s082.g0013.t1 | |
| Lsat_s082.g0014.t1 | CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN A |
| Lsat_s082.g0015.t1 | |
| Lsat_s082.g0016.t1 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
| Lsat_s082.g0017.t1 | UNCHARACTERIZED |
| Lsat_s082.g0018.t1 | NADH DEHYDROGENASE |
| Lsat_s082.g0019.t1 | |
| Lsat_s082.g0020.t1 | TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED |
| Lsat_s082.g0021.t1 | EPM2A-INTERACTING PROTEIN 1 |
| Lsat_s082.g0022.t1 | DNA2/NAM7 HELICASE FAMILY |
| Lsat_s082.g0023.t1 | CHARGED MULTIVESICULAR BODY PROTEIN |
| Lsat_s082.g0024.t1 | NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1 |
| Lsat_s082.g0025.t1 | |
| Lsat_s082.g0026.t1 | SAP18 |
| Lsat_s082.g0027.t1 | RETINOIC ACID-INDUCED PROTEIN 2 |
| Lsat_s082.g0028.t1 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| Lsat_s082.g0029.t1 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| Lsat_s082.g0030.t1 | AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 |
| Lsat_s082.g0031.t1 | CENTROSOMAL PROTEIN OF 290 KDA |
| Lsat_s082.g0032.t1 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| Lsat_s082.g0033.t1 | |
| Lsat_s082.g0034.t1 | |
| Lsat_s082.g0035.t1 | CALCIPRESSIN |
| Lsat_s082.g0036.t1 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| Lsat_s082.g0037.t1 | - |
| Lsat_s082.g0038.t1 | NO EXINE FORMATION 1 |
| Lsat_s082.g0039.t1 | ZINC FINGER PROTEIN AEBP2 |
| Lsat_s082.g0040.t1 | |
| Lsat_s082.g0041.t1 | TUFTELIN-INTERACTING PROTEIN 11-RELATED |
| Lsat_s082.g0042.t1 | SMALL VCP/P97-INTERACTING PROTEIN |
| Lsat_s082.g0043.t1 | NH 3 /GLUTAMINE-DEPENDENT NAD + SYNTHETASE |
| Lsat_s082.g0044.t1 | |
| Lsat_s082.g0045.t1 | MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED |
| Lsat_s082.g0046.t1 | BESTROPHIN |
| Lsat_s082.g0047.t1 | SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN |
| Lsat_s082.g0048.t1 | UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE |
| Lsat_s082.g0049.t1 | CENTROSOMAL PROTEIN 2 |
| Lsat_s082.g0050.t1 | |
| Lsat_s082.g0051.t1 | |
| Lsat_s082.g0052.t1 | ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. |
| Lsat_s082.g0053.t1 |
