About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s091.g0009.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s091.g0010.t1RGD1565685 PROTEIN
Lsat_s091.g0011.t1
Lsat_s091.g0012.t1PROTEIN B, PUTATIVE-RELATED-RELATED
Lsat_s091.g0013.t1
Lsat_s091.g0014.t1
Lsat_s091.g0015.t1RGD1565685 PROTEIN
Lsat_s091.g0016.t1
Lsat_s091.g0017.t1LORICRIN
Lsat_s091.g0018.t1
Lsat_s091.g0019.t1
Lsat_s091.g0020.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s091.g0021.t1CYTOKINE RECEPTOR
Lsat_s091.g0022.t1
Lsat_s091.g0023.t1
Lsat_s091.g0024.t1
Lsat_s091.g0025.t1
Lsat_s091.g0026.t1
Lsat_s091.g0027.t1
Lsat_s091.g0028.t1MATRIX METALLOPROTEINASE
Lsat_s091.g0029.t1CALPAIN
Lsat_s091.g0030.t1
Lsat_s091.g0031.t1INTEGRAL MEMBRANE PROTEIN DGCR2/IDD
Lsat_s091.g0032.t1PHD FINGER PROTEIN 12
Lsat_s091.g0033.t1
Lsat_s091.g0034.t1
Lsat_s091.g0035.t1UNCHARACTERIZED
Lsat_s091.g0036.t1
Lsat_s091.g0037.t1
Lsat_s091.g0038.t1RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6
Lsat_s091.g0039.t1
Lsat_s091.g0040.t1
Lsat_s091.g0041.t1
Lsat_s091.g0042.t1RAS-RELATED PROTEIN RAB
Lsat_s091.g0043.t1
Lsat_s091.g0044.t1
Lsat_s091.g0045.t1
Lsat_s091.g0046.t1NUCLEAR CAP-BINDING PROTEIN SUBUNIT 3
Lsat_s091.g0047.t1TRNASE Z TRZ1
Lsat_s091.g0048.t1PTD012 PROTEIN
Lsat_s091.g0049.t1
Lsat_s091.g0050.t1
Lsat_s091.g0051.t1
Lsat_s091.g0052.t1PTD012 PROTEIN
Lsat_s091.g0053.t1
Lsat_s091.g0054.t1RNA BINDING PROTEIN
Lsat_s091.g0055.t1ZGC:174356
Lsat_s091.g0056.t1
Lsat_s091.g0057.t1
Lsat_s091.g0058.t1URICASE AND TRANSTHYRETIN-RELATED
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