About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10685-
Paelopatides10686-
Paelopatides10687GABA-B RECEPTOR
Paelopatides10688GABA-B RECEPTOR
Paelopatides10689PROTEIN CBG26694
Paelopatides10690PROTEIN CBG26694
Paelopatides10691NUCLEOSIDE DIPHOSPHATE KINASE
Paelopatides10692ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides10693PROTEIN CBG26694
Paelopatides10694ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides10695PROTEIN CBG26694
Paelopatides10696-
Paelopatides10697PROTEIN CBG26694
Paelopatides10698RAB6-INTERACTING PROTEIN GORAB
Paelopatides10700-
Paelopatides10701PROTEIN CBG26694
Paelopatides10702PROTEIN CBG26694
Paelopatides10703-
Paelopatides10704METHYLTRANSFERASE
Paelopatides10705ALPHA-2,8-SIALYLTRANSFERASE
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