About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10645HEPARAN SULFATE SULFOTRANSFERASE
Paelopatides10646ZNF44 PROTEIN
Paelopatides10647LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides10648-
Paelopatides10649RRM DOMAIN-CONTAINING PROTEIN
Paelopatides10650RRM DOMAIN-CONTAINING PROTEIN
Paelopatides10651SOLUTE CARRIER FAMILY 22 MEMBER 18
Paelopatides10652SOLUTE CARRIER FAMILY 22 MEMBER 18
Paelopatides10653-
Paelopatides10654INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS
Paelopatides10655EPM2A-INTERACTING PROTEIN 1
Paelopatides10656AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
Paelopatides10657POL PROTEIN
Paelopatides10658-
Paelopatides10659PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1
Paelopatides10660MUCIN-22
Paelopatides10661ARYLSULFATASE FAMILY MEMBER
Paelopatides10662-
Paelopatides10663-
Paelopatides10664-
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