About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10706ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides10707-
Paelopatides10708-
Paelopatides10709LEUCINE ZIPPER TRANSCRIPTION FACTOR LIKE
Paelopatides10710LEUCINE ZIPPER TRANSCRIPTION FACTOR LIKE
Paelopatides10711MAINTENANCE OF KILLER 16 MAK16 PROTEIN-RELATED
Paelopatides10712CYTOCHROME P450 26
Paelopatides10713SIALIDASE
Paelopatides10714-
Paelopatides10715-
Paelopatides10716EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
Paelopatides10717FIBRINOGEN ALPHA CHAIN
Paelopatides10718FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides10719-
Paelopatides10720MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Paelopatides10721PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides10722-
Paelopatides10723TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED
Paelopatides10724REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides10725CXC DOMAIN-CONTAINING PROTEIN-RELATED
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