About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10768REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides10769-
Paelopatides10770PROTEIN CBG26694
Paelopatides10771MONOCARBOXYLATE TRANSPORTER
Paelopatides10772KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
Paelopatides10773ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides10774PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides10775NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides10776NETRIN RECEPTOR UNC5
Paelopatides10777MITOCHONDRIAL ATP SYNTHASE B CHAIN
Paelopatides10778PEROXISOMAL SARCOSINE OXIDASE
Paelopatides10779-
Paelopatides10780ALPHA-GLUCOSIDASE
Paelopatides10781ADP-DEPENDENT GLUCOKINASE
Paelopatides10782ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
Paelopatides10783EPM2A-INTERACTING PROTEIN 1
Paelopatides10784TRANSPOSON
Paelopatides10785-
Paelopatides10786-
Paelopatides10787PROTEIN CBG26694
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