About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s093.g0036.t1
Lsat_s093.g0037.t1CHITINASE
Lsat_s093.g0038.t1ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED
Lsat_s093.g0039.t1
Lsat_s093.g0040.t1CRUMBS FAMILY MEMBER
Lsat_s093.g0041.t1
Lsat_s093.g0042.t1TETRASPANIN
Lsat_s093.g0043.t1NADH-UBIQUINONE OXIDOREDUCTASE FLAVOPROTEIN 1 NDUFV1
Lsat_s093.g0044.t1ASAP FAMILY MEMBER
Lsat_s093.g0045.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 60
Lsat_s093.g0046.t1CYSTEINE PROTEASE FAMILY C1-RELATED
Lsat_s093.g0047.t1
Lsat_s093.g0048.t1E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
Lsat_s093.g0049.t1LEISHMANOLYSIN-LIKE PEPTIDASE
Lsat_s093.g0050.t1ALTERNATIVE OXIDASE
Lsat_s093.g0051.t1KH DOMAIN CONTAINING RNA BINDING PROTEIN
Lsat_s093.g0052.t1MOLYBDOPTERIN COFACTOR SULFURASE MOSC
Lsat_s093.g0053.t1
Lsat_s093.g0054.t1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Lsat_s093.g0055.t1
Lsat_s093.g0056.t1UNCHARACTERIZED
Lsat_s093.g0057.t1
Lsat_s093.g0058.t1
Lsat_s093.g0059.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s093.g0060.t1MIR-INTERACTING SAPOSIN-LIKE PROTEIN
Lsat_s093.g0061.t1
Lsat_s093.g0062.t1PHOSPHOENOLPYRUVATE CARBOXYKINASE
Lsat_s093.g0063.t1PROTEIN FAM221A-RELATED
Lsat_s093.g0064.t1FAM11A, B PROTEIN
Lsat_s093.g0065.t1
Lsat_s093.g0066.t1-
Lsat_s093.g0067.t1LD33804P
Lsat_s093.g0068.t1
Lsat_s093.g0069.t1-
Lsat_s093.g0070.t1-
Lsat_s093.g0071.t1-
Lsat_s093.g0072.t1-
Lsat_s093.g0073.t1RIBOPHORIN II
Lsat_s093.g0074.t1TUMOR PROTEIN D52
Lsat_s093.g0075.t1RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
Lsat_s093.g0076.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Lsat_s094.g0001.t1
Lsat_s094.g0002.t1PEPTIDOGLYCAN RECOGNITION PROTEIN
Lsat_s094.g0003.t1PEPTIDOGLYCAN RECOGNITION PROTEIN
Lsat_s094.g0004.t1ALANINE RACEMASE
Lsat_s094.g0005.t1ALANINE RACEMASE
Lsat_s094.g0006.t1CELL FATE DETERMINING PROTEIN MAB21-RELATED
Lsat_s094.g0007.t1SOLUTE CARRIER FAMILY 22 MEMBER
Lsat_s094.g0008.t1ELONGATOR COMPLEX PROTEIN 1
Lsat_s094.g0009.t1ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
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