About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s094.g0010.t1
Lsat_s094.g0011.t1
Lsat_s094.g0012.t1
Lsat_s094.g0013.t1
Lsat_s094.g0014.t1
Lsat_s094.g0015.t1
Lsat_s094.g0016.t1
Lsat_s094.g0017.t1
Lsat_s094.g0018.t1
Lsat_s094.g0019.t1PROTEIN FAM227B
Lsat_s094.g0020.t1BETA-HEXOSAMINIDASE
Lsat_s094.g0021.t1
Lsat_s094.g0022.t1BETA-HEXOSAMINIDASE
Lsat_s094.g0023.t1BETA-HEXOSAMINIDASE
Lsat_s094.g0024.t1
Lsat_s094.g0025.t1FLAP ENDONUCLEASE FAMILY MEMBER
Lsat_s094.g0026.t1
Lsat_s094.g0027.t1THROMBOSPONDIN
Lsat_s094.g0028.t1
Lsat_s094.g0029.t1SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL
Lsat_s094.g0030.t1
Lsat_s094.g0031.t1SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL
Lsat_s094.g0032.t1
Lsat_s094.g0033.t1SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL
Lsat_s094.g0034.t1
Lsat_s094.g0035.t1RNA-BINDING PROTEIN 8A
Lsat_s094.g0036.t1
Lsat_s094.g0037.t1PEROXISOMAL BIOGENESIS FACTOR 11
Lsat_s094.g0038.t139S RIBOSOMAL PROTEIN L54, MITOCHONDRIAL
Lsat_s094.g0039.t1SORTING NEXIN-22 AND 24
Lsat_s094.g0040.t1REGULATOR OF CHROMOSOME CONDENSATION
Lsat_s094.g0041.t1
Lsat_s094.g0042.t1REGULATOR OF CHROMOSOME CONDENSATION
Lsat_s094.g0043.t1
Lsat_s094.g0044.t1
Lsat_s094.g0045.t1NUCLEAR HORMONE RECEPTOR
Lsat_s094.g0046.t1
Lsat_s094.g0047.t1
Lsat_s094.g0048.t1
Lsat_s094.g0049.t1
Lsat_s094.g0050.t1
Lsat_s094.g0051.t1
Lsat_s094.g0052.t1
Lsat_s094.g0053.t1MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE
Lsat_s094.g0054.t1UNCHARACTERIZED
Lsat_s094.g0055.t1
Lsat_s094.g0056.t1
Lsat_s094.g0057.t1
Lsat_s094.g0058.t1
Lsat_s094.g0059.t1
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