About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10998NITRILASE-RELATED
Paelopatides10999CELL DIVISION CYCLE 16,23,27
Paelopatides11000INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides11001-
Paelopatides11002RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides11003INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides11004-
Paelopatides11005EPM2A-INTERACTING PROTEIN 1
Paelopatides11006-
Paelopatides11007SI:CH211-196P9.1-RELATED
Paelopatides11008-
Paelopatides11009PROTEIN CBG26694
Paelopatides11010ENDONUCLEASE-RELATED
Paelopatides11011REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides11012INTEGRASE_SAM-LIKE_N DOMAIN-CONTAINING PROTEIN
Paelopatides11013-
Paelopatides11014ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides11015SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides11016TRANSPOSON
Paelopatides11017-
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