About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10978ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides10979TATA BOX-BINDING PROTEIN ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT C
Paelopatides10980POL PROTEIN
Paelopatides10981-
Paelopatides10982ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides10983MULTICOPPER OXIDASE-RELATED
Paelopatides10984-
Paelopatides1098552 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides10986REVERSE TRANSCRIPTASES
Paelopatides10987-
Paelopatides10988-
Paelopatides10989ALKALINE PHOSPHATASE
Paelopatides10990ALKALINE PHOSPHATASE
Paelopatides10991SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN
Paelopatides10992HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides10993-
Paelopatides10994POL PROTEIN
Paelopatides10995-
Paelopatides10996-
Paelopatides10997-
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