About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10%28,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000062l.25SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER
PMEG.utg000062l.26TRANSMEMBRANE PROTEIN 237
PMEG.utg000062l.27SULFOPYRUVATE DECARBOXYLASE SUBUNIT ALPHA
PMEG.utg000062l.28EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
PMEG.utg000062l.29SODIUM/CHLORIDE DEPENDENT TRANSPORTER
PMEG.utg000062l.3NEUROTRANSMITTER GATED ION CHANNEL
PMEG.utg000062l.30ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN
PMEG.utg000062l.31PALMITOYLTRANSFERASE ZDHHC16
PMEG.utg000062l.32RUN AND SH3 DOMAIN CONTAINING
PMEG.utg000062l.33LD33804P
PMEG.utg000062l.34HOMEOBOX PROTEIN ARISTALESS
PMEG.utg000062l.35REGUCALCIN
PMEG.utg000062l.36CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR
PMEG.utg000062l.37BETA-ALA-HIS DIPEPTIDASE
PMEG.utg000062l.38PHD AND RING FINGER DOMAIN-CONTAINING PROTEIN 1
PMEG.utg000062l.39PROTEIN PITCHFORK
PMEG.utg000062l.4NEUROTRANSMITTER GATED ION CHANNEL
PMEG.utg000062l.40TRANSCRIPTION INITIATION FACTOR IIH-RELATED
PMEG.utg000062l.41UBIQUITIN-CONJUGATING ENZYME E2
PMEG.utg000062l.42GLYCOSYLTRANSFERASE-RELATED
PMEG.utg000062l.43NUCLEAR FACTOR-RELATED
PMEG.utg000062l.44CRYPTOCHROME
PMEG.utg000062l.45UPF0705 PROTEIN C11ORF49
PMEG.utg000062l.4640S RIBOSOMAL PROTEIN S10
PMEG.utg000062l.47ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2
PMEG.utg000062l.48RAS-LIKE FAMILY MEMBER 11
PMEG.utg000062l.49TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED
PMEG.utg000062l.5OS10G0105400 PROTEIN
PMEG.utg000062l.50UBIQUITIN-PROTEIN LIGASE E3A-RELATED
PMEG.utg000062l.51TROPONIN T
PMEG.utg000062l.52
PMEG.utg000062l.53
PMEG.utg000062l.54DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5 FAMILY MEMBER
PMEG.utg000062l.55TETRASPANIN
PMEG.utg000062l.56
PMEG.utg000062l.57
PMEG.utg000062l.58ARYLSULFATASE
PMEG.utg000062l.59SCY1-RELATED S/T PROTEIN KINASE-LIKE
PMEG.utg000062l.6SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
PMEG.utg000062l.60ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
PMEG.utg000062l.61ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
PMEG.utg000062l.62
PMEG.utg000062l.63ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
PMEG.utg000062l.64
PMEG.utg000062l.65-
PMEG.utg000062l.66UBX DOMAIN CONTAINING PROTEIN
PMEG.utg000062l.68SULFOTRANSFERASE SULT
PMEG.utg000062l.69
PMEG.utg000062l.7
PMEG.utg000062l.70MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED
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