The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000062l.25 | SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER |
PMEG.utg000062l.26 | TRANSMEMBRANE PROTEIN 237 |
PMEG.utg000062l.27 | SULFOPYRUVATE DECARBOXYLASE SUBUNIT ALPHA |
PMEG.utg000062l.28 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA |
PMEG.utg000062l.29 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
PMEG.utg000062l.3 | NEUROTRANSMITTER GATED ION CHANNEL |
PMEG.utg000062l.30 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
PMEG.utg000062l.31 | PALMITOYLTRANSFERASE ZDHHC16 |
PMEG.utg000062l.32 | RUN AND SH3 DOMAIN CONTAINING |
PMEG.utg000062l.33 | LD33804P |
PMEG.utg000062l.34 | HOMEOBOX PROTEIN ARISTALESS |
PMEG.utg000062l.35 | REGUCALCIN |
PMEG.utg000062l.36 | CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR |
PMEG.utg000062l.37 | BETA-ALA-HIS DIPEPTIDASE |
PMEG.utg000062l.38 | PHD AND RING FINGER DOMAIN-CONTAINING PROTEIN 1 |
PMEG.utg000062l.39 | PROTEIN PITCHFORK |
PMEG.utg000062l.4 | NEUROTRANSMITTER GATED ION CHANNEL |
PMEG.utg000062l.40 | TRANSCRIPTION INITIATION FACTOR IIH-RELATED |
PMEG.utg000062l.41 | UBIQUITIN-CONJUGATING ENZYME E2 |
PMEG.utg000062l.42 | GLYCOSYLTRANSFERASE-RELATED |
PMEG.utg000062l.43 | NUCLEAR FACTOR-RELATED |
PMEG.utg000062l.44 | CRYPTOCHROME |
PMEG.utg000062l.45 | UPF0705 PROTEIN C11ORF49 |
PMEG.utg000062l.46 | 40S RIBOSOMAL PROTEIN S10 |
PMEG.utg000062l.47 | ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2 |
PMEG.utg000062l.48 | RAS-LIKE FAMILY MEMBER 11 |
PMEG.utg000062l.49 | TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED |
PMEG.utg000062l.5 | OS10G0105400 PROTEIN |
PMEG.utg000062l.50 | UBIQUITIN-PROTEIN LIGASE E3A-RELATED |
PMEG.utg000062l.51 | TROPONIN T |
PMEG.utg000062l.52 | |
PMEG.utg000062l.53 | |
PMEG.utg000062l.54 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5 FAMILY MEMBER |
PMEG.utg000062l.55 | TETRASPANIN |
PMEG.utg000062l.56 | |
PMEG.utg000062l.57 | |
PMEG.utg000062l.58 | ARYLSULFATASE |
PMEG.utg000062l.59 | SCY1-RELATED S/T PROTEIN KINASE-LIKE |
PMEG.utg000062l.6 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
PMEG.utg000062l.60 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
PMEG.utg000062l.61 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
PMEG.utg000062l.62 | |
PMEG.utg000062l.63 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
PMEG.utg000062l.64 | |
PMEG.utg000062l.65 | - |
PMEG.utg000062l.66 | UBX DOMAIN CONTAINING PROTEIN |
PMEG.utg000062l.68 | SULFOTRANSFERASE SULT |
PMEG.utg000062l.69 | |
PMEG.utg000062l.7 | |
PMEG.utg000062l.70 | MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED |