The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000065l.72 | |
PMEG.utg000065l.73 | NUCLEAR GTPASE, GERMINAL CENTER-ASSOCIATED, TANDEM DUPLICATE 3 |
PMEG.utg000065l.74 | SET AND MYND DOMAIN-CONTAINING PROTEIN 5 |
PMEG.utg000065l.75 | UBIQUITIN-CONJUGATING ENZYME E2 |
PMEG.utg000065l.76 | PHOSPHOLIPID ACYLTRANSFERASE |
PMEG.utg000065l.77 | NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN |
PMEG.utg000065l.78 | UNC-93 RELATED |
PMEG.utg000065l.79 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
PMEG.utg000065l.8 | TYROSINASE FAMILY MEMBER |
PMEG.utg000065l.80 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
PMEG.utg000065l.81 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
PMEG.utg000065l.82 | MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 |
PMEG.utg000065l.83 | PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE |
PMEG.utg000065l.84 | PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE |
PMEG.utg000065l.85 | SULFOTRANSFERASE SULT |
PMEG.utg000065l.86 | PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE |
PMEG.utg000065l.87 | GLYCINE CLEAVAGE SYSTEM H PROTEIN |
PMEG.utg000065l.88 | PHOSPHOETHANOLAMINE METHYLTRANSFERASE |
PMEG.utg000065l.89 | PHOSPHOETHANOLAMINE METHYLTRANSFERASE |
PMEG.utg000065l.9 | TYROSINASE FAMILY MEMBER |
PMEG.utg000065l.90 | PHOSPHOETHANOLAMINE METHYLTRANSFERASE |
PMEG.utg000065l.91 | |
PMEG.utg000065l.92 | SOLUTE CARRIER FAMILY 52 |
PMEG.utg000065l.93 | CASPASE |
PMEG.utg000065l.94 | SOMETHING ABOUT SILENCING PROTEIN 10-RELATED |
PMEG.utg000065l.95 | ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-BINDING PROTEIN |
PMEG.utg000065l.96 | |
PMEG.utg000065l.97 | LEUCYL-TRNA SYNTHETASE |
PMEG.utg000066l.1 | SCAVENGER RECEPTOR CLASS F |
PMEG.utg000066l.3 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
PMEG.utg000066l.4 | ADAPTIN, ALPHA/GAMMA/EPSILON |
PMEG.utg000066l.5 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
PMEG.utg000066l.6 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
PMEG.utg000066l.7 | AMINE OXIDASE |
PMEG.utg000067l.1 | |
PMEG.utg000067l.10 | UNCHARACTERIZED |
PMEG.utg000067l.11 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP7/14 |
PMEG.utg000067l.12 | TRANSLATION ELONGATION FACTOR-RELATED |
PMEG.utg000067l.13 | 39S RIBOSOMAL PROTEIN L10, MITOCHONDRIAL |
PMEG.utg000067l.14 | FATTY ACID SYNTHASE |
PMEG.utg000067l.15 | |
PMEG.utg000067l.16 | BETA-1,4-GALACTOSYLTRANSFERASE |
PMEG.utg000067l.17 | PATCHED-RELATED |
PMEG.utg000067l.18 | PROTEIN FMP42 |
PMEG.utg000067l.19 | SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED |
PMEG.utg000067l.2 | |
PMEG.utg000067l.20 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP7/14 |
PMEG.utg000067l.21 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP7/14 |
PMEG.utg000067l.22 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP7/14 |
PMEG.utg000067l.23 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |