The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000065l.27 | TYROSINASE FAMILY MEMBER |
| PMEG.utg000065l.28 | AAA DOMAIN-CONTAINING |
| PMEG.utg000065l.29 | AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C |
| PMEG.utg000065l.3 | - |
| PMEG.utg000065l.30 | BETA-HEXOSAMINIDASE |
| PMEG.utg000065l.31 | HOMOCYSTEINE-RESPONSIVE ENDOPLASMIC RETICULUM-RESIDENT UNIQUITIN-LIKE DOMAIN HERPUD PROTEIN FAMILY MEMBER |
| PMEG.utg000065l.32 | MTG8 ETO EIGHT TWENTY ONE PROTEIN |
| PMEG.utg000065l.33 | REGULATOR OF MICROTUBULE DYNAMICS PROTEIN |
| PMEG.utg000065l.34 | TRANSIENT RECEPTOR POTENTIAL CHANNEL 4-ASSOCIATED PROTEIN TCPC4AP |
| PMEG.utg000065l.35 | KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED |
| PMEG.utg000065l.36 | BTG3-ASSOCIATED NUCLEAR PROTEIN BANP |
| PMEG.utg000065l.37 | TYROSINE-PROTEIN KINASE |
| PMEG.utg000065l.38 | TYROSINE-PROTEIN KINASE |
| PMEG.utg000065l.39 | RNA HELICASE |
| PMEG.utg000065l.4 | T-CELL ACTIVATION INHIBITOR, MITOCHONDRIAL |
| PMEG.utg000065l.40 | PEROXISOMAL SARCOSINE OXIDASE |
| PMEG.utg000065l.41 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 60 |
| PMEG.utg000065l.42 | COLLAGEN ALPHA |
| PMEG.utg000065l.43 | UNCHARACTERIZED |
| PMEG.utg000065l.44 | PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT |
| PMEG.utg000065l.45 | |
| PMEG.utg000065l.46 | ALPHA-L-FUCOSIDASE |
| PMEG.utg000065l.47 | POTE ANKYRIN DOMAIN |
| PMEG.utg000065l.48 | ATM INTERACTOR |
| PMEG.utg000065l.49 | GH16843P |
| PMEG.utg000065l.5 | TYROSINASE FAMILY MEMBER |
| PMEG.utg000065l.50 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| PMEG.utg000065l.51 | |
| PMEG.utg000065l.52 | |
| PMEG.utg000065l.53 | |
| PMEG.utg000065l.54 | LATE SECRETORY PATHWAY PROTEIN AVL9-RELATED |
| PMEG.utg000065l.55 | NFAT |
| PMEG.utg000065l.56 | UBIQUITIN-CONJUGATING ENZYME E2 |
| PMEG.utg000065l.57 | TRANS-SULFURATION ENZYME FAMILY MEMBER |
| PMEG.utg000065l.58 | HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 2 |
| PMEG.utg000065l.59 | GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2 |
| PMEG.utg000065l.6 | TYROSINASE FAMILY MEMBER |
| PMEG.utg000065l.60 | CYSTEINE DESULFURYLASE FAMILY MEMBER |
| PMEG.utg000065l.61 | GMP REDUCTASE |
| PMEG.utg000065l.62 | INOSITOL MONOPHOSPHATASE |
| PMEG.utg000065l.63 | RIBOSOME BIOGENESIS PROTEIN BOP1 BLOCK OF PROLIFERATION 1 PROTEIN |
| PMEG.utg000065l.64 | SARCOSINE DEHYDROGENASE-RELATED |
| PMEG.utg000065l.65 | AMINOMETHYLTRANSFERASE |
| PMEG.utg000065l.66 | 4.1 G PROTEIN |
| PMEG.utg000065l.67 | DYNEIN REGULATORY COMPLEX SUBUNIT 4 |
| PMEG.utg000065l.68 | TESTOSTERONE-REGULATED PROTEIN RP2 |
| PMEG.utg000065l.69 | - |
| PMEG.utg000065l.7 | TYROSINASE FAMILY MEMBER |
| PMEG.utg000065l.70 | DNAJ-LIKE-2, ISOFORM A-RELATED |
| PMEG.utg000065l.71 | GDP-MANNOSE 4,6-DEHYDRATASE |
