About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides11938-
Paelopatides11939-
Paelopatides11940-
Paelopatides11941-
Paelopatides11942-
Paelopatides11943-
Paelopatides11944-
Paelopatides11945-
Paelopatides11946E3 UBIQUITIN-PROTEIN LIGASE MYCBP2
Paelopatides11947GAG-RELATED PROTEIN
Paelopatides11948ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides11949NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides11950-
Paelopatides11951NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides11952-
Paelopatides11953-
Paelopatides11954-
Paelopatides11955SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides11956LEUCINE RICH REPEAT FAMILY PROTEIN
Paelopatides11957B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
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