About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides11979ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides11980PROTEIN CBG26694
Paelopatides11981SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides11982PROTEIN CBG26694
Paelopatides11983-
Paelopatides11984-
Paelopatides11985LIPOXYGENASE
Paelopatides11986-
Paelopatides11987REMODELING AND SPACING FACTOR 1
Paelopatides11988-
Paelopatides11989-
Paelopatides11990EXPRESSED PROTEIN
Paelopatides11991ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides11992CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Paelopatides11993BUCENTAUR RELATED
Paelopatides11994-
Paelopatides11995G PROTEIN-COUPLED RECEPTOR
Paelopatides11996ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides11997NGG1 INTERACTING FACTOR 3
Paelopatides11998-
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