The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000067l.24 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
| PMEG.utg000067l.25 | MICROSOMAL DIPEPTIDASE |
| PMEG.utg000067l.26 | SERINE/THREONINE-PROTEIN KINASE 17 |
| PMEG.utg000067l.27 | DEPHOSPHO-COA KINASE-RELATED |
| PMEG.utg000067l.28 | INTEGRIN BETA SUBUNIT |
| PMEG.utg000067l.29 | INTEGRIN BETA SUBUNIT |
| PMEG.utg000067l.3 | POU DOMAIN |
| PMEG.utg000067l.30 | |
| PMEG.utg000067l.31 | |
| PMEG.utg000067l.32 | DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL |
| PMEG.utg000067l.34 | DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL |
| PMEG.utg000067l.35 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 221 |
| PMEG.utg000067l.36 | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER |
| PMEG.utg000067l.37 | RESPIRATORY NITRATE REDUCTASE |
| PMEG.utg000067l.4 | VACUOLAR PROTEIN SORTING VPS41 |
| PMEG.utg000067l.5 | LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1 |
| PMEG.utg000067l.6 | DUF614 FAMILY PROTEIN-RELATED |
| PMEG.utg000067l.7 | SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1 |
| PMEG.utg000067l.8 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
| PMEG.utg000067l.9 | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE |
| PMEG.utg000068l.1 | |
| PMEG.utg000068l.10 | WW DOMAIN BINDING PROTEIN 4 |
| PMEG.utg000068l.11 | POLYCOMB GROUP PROTEIN |
| PMEG.utg000068l.12 | SMALL UBIQUITIN-RELATED MODIFIER |
| PMEG.utg000068l.13 | CUBILIN-LIKE PROTEIN |
| PMEG.utg000068l.14 | FI01459P |
| PMEG.utg000068l.15 | ZINC FINGER MATRIN-TYPE PROTEIN 2 |
| PMEG.utg000068l.16 | |
| PMEG.utg000068l.17 | INHIBITOR OF GROWTH PROTEIN |
| PMEG.utg000068l.18 | CARRIER DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000068l.19 | SERINE/THREONINE-PROTEIN KINASE PLK |
| PMEG.utg000068l.2 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| PMEG.utg000068l.20 | HSC70CB, ISOFORM G-RELATED |
| PMEG.utg000068l.21 | SHORT COILED COIL PROTEIN |
| PMEG.utg000068l.22 | FERM AND PDZ DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
| PMEG.utg000068l.23 | THIOESTERASE |
| PMEG.utg000068l.24 | DAP3-BINDING CELL DEATH ENHANCER 1 |
| PMEG.utg000068l.25 | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT |
| PMEG.utg000068l.26 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
| PMEG.utg000068l.27 | TNFR-CYS DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000068l.28 | NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 |
| PMEG.utg000068l.29 | PROGESTERONE-INDUCED BLOCKING FACTOR 1 |
| PMEG.utg000068l.3 | METHYLTRANSFERASE-LIKE PROTEIN 24 |
| PMEG.utg000068l.30 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| PMEG.utg000068l.31 | RAB GDP-DISSOCIATION INHIBITOR |
| PMEG.utg000068l.32 | NUCLEOSIDE DIPHOSPHATE KINASE |
| PMEG.utg000068l.33 | |
| PMEG.utg000068l.34 | UNCHARACTERIZED |
| PMEG.utg000068l.35 | UNCHARACTERIZED |
| PMEG.utg000068l.36 | E3 UBIQUITIN-PROTEIN LIGASE MYCBP2 |
