The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000069l.5 | U6 SNRNA-ASSOCIATED PROTEIN |
PMEG.utg000069l.6 | |
PMEG.utg000069l.7 | |
PMEG.utg000069l.8 | |
PMEG.utg000069l.9 | DNAJ HOMOLOG SUBFAMILY C MEMBER 22 |
PMEG.utg000070l.1 | - |
PMEG.utg000070l.10 | GH04784P |
PMEG.utg000070l.11 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
PMEG.utg000070l.12 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
PMEG.utg000070l.13 | PAIRED BOX PROTEIN PAX-6-RELATED-RELATED |
PMEG.utg000070l.14 | ABC TRANSPORTER G FAMILY MEMBER 28 |
PMEG.utg000070l.15 | PDZ DOMAIN CONTAINING PROTEIN |
PMEG.utg000070l.16 | CNH DOMAIN CONTAINING |
PMEG.utg000070l.17 | SINGLE-STRANDED DNA-BINDING PROTEIN |
PMEG.utg000070l.18 | LIPID PHOSPHATE PHOSPHATASE |
PMEG.utg000070l.19 | THYMOCYTE NUCLEAR PROTEIN 1 |
PMEG.utg000070l.20 | TETRASPANIN |
PMEG.utg000070l.21 | DOUBLECORTIN DOMAIN-CONTAINING PROTEIN 1 |
PMEG.utg000070l.22 | ADAPTIN, ALPHA/GAMMA/EPSILON |
PMEG.utg000070l.23 | TETRASPANIN |
PMEG.utg000070l.24 | CALPAIN |
PMEG.utg000070l.26 | CGI-141-RELATED/LIPASE CONTAINING PROTEIN |
PMEG.utg000070l.27 | OROFACIAL CLEFT 1 CANDIDATE GENE 1 PROTEIN |
PMEG.utg000070l.3 | AATF PROTEIN APOPTOSIS ANTAGONIZING TRANSCRIPTION FACTOR |
PMEG.utg000070l.4 | UNCHARACTERIZED |
PMEG.utg000070l.5 | FI04035P |
PMEG.utg000070l.6 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
PMEG.utg000070l.7 | CELL CYCLE CONTROL PROTEIN 50 |
PMEG.utg000070l.8 | TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11-RELATED |
PMEG.utg000070l.9 | SERINE/THREONINE-PROTEIN KINASE |
PMEG.utg000072l.1 | SEMAPHORIN |
PMEG.utg000072l.10 | QUINONE OXIDOREDUCTASE |
PMEG.utg000072l.100 | UNCHARACTERIZED |
PMEG.utg000072l.101 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
PMEG.utg000072l.102 | POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 |
PMEG.utg000072l.103 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
PMEG.utg000072l.104 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
PMEG.utg000072l.105 | SOLUTE CARRIER FAMILY 5 |
PMEG.utg000072l.106 | SOLUTE CARRIER FAMILY 5 |
PMEG.utg000072l.107 | SOLUTE CARRIER FAMILY 5 |
PMEG.utg000072l.108 | MITOGUARDIN |
PMEG.utg000072l.109 | REGULATOR OF G-PROTEIN SIGNALING 3 |
PMEG.utg000072l.11 | INNEXIN |
PMEG.utg000072l.110 | |
PMEG.utg000072l.111 | LIPID PHOSPHATE PHOSPHATASE |
PMEG.utg000072l.112 | SPONDIN |
PMEG.utg000072l.113 | OXIDASE/PEROXIDASE |
PMEG.utg000072l.114 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
PMEG.utg000072l.115 | ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2 |
PMEG.utg000072l.116 | CELL DIVISION PROTEIN KINASE |