About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides12131RCG26366
Paelopatides12132HOMEOBOX PROTEIN NKX
Paelopatides12133-
Paelopatides12134-
Paelopatides12135-
Paelopatides12136REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides12137-
Paelopatides12138ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides12139SPERMATOGENESIS-ASSOCIATED PROTEIN 22
Paelopatides12140SUPPRESSOR OF TY 4
Paelopatides12141SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7
Paelopatides12142-
Paelopatides12143SUGAR KINASE
Paelopatides12144UNCHARACTERIZED
Paelopatides12145FATTY ACID ACYL TRANSFERASE-RELATED
Paelopatides12146L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides12147-
Paelopatides12148-
Paelopatides12149-
Paelopatides12150BUCENTAUR RELATED
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