About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides12405-
Paelopatides12406PROTEIN CBG26694
Paelopatides12407TRANSPOSASE, PUTATIVE-RELATED
Paelopatides12408CXC2 DOMAIN-CONTAINING PROTEIN
Paelopatides12409ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides12410POL PROTEIN
Paelopatides12411FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides12412-
Paelopatides12413LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides12414PROTEIN CBG26694
Paelopatides12415TRANSPOSON
Paelopatides12416-
Paelopatides12418-
Paelopatides12419-
Paelopatides12420-
Paelopatides12421PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides12422PROTEIN CBG26694
Paelopatides12423LD33804P
Paelopatides12424-
Paelopatides12425TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3
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